Message boards : Number crunching : Problems with Rosetta version 5.62
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David E K Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 1 Jul 05 Posts: 1480 Credit: 4,334,829 RAC: 0 |
Please post issues with version 5.62 here. |
komandar Send message Joined: 13 Dec 06 Posts: 4 Credit: 767,791 RAC: 0 |
Still no 64bit support ='(. |
Odysseus Send message Joined: 3 May 07 Posts: 14 Credit: 241,831 RAC: 0 |
I just started this project today, and it’s not going at all well so far. All three of the tasks I’ve begun errored out immediately: the output in the results says <message> process got signal 5 </message> <stderr_txt> dyld: rosetta_5.62_powerpc-apple-darwin Undefined symbols: rosetta_5.62_powerpc-apple-darwin undefined reference to ___cxa_atexit expected to be defined in /usr/lib/libSystem.B.dylib </stderr_txt> I’m running several other BOINC projects with no problems on this host. The system is oldish, but appears to meet the posted requirements: Mac G4/733, 1 GB RAM, Mac OS v10.3.9, BOINC v5.4.9. I also have X11, so all the standard Unix libraries should be present—but I’m prepared to install whatever is necessary, within reason … Any advice on how to get this app to run? |
Rhiju Volunteer moderator Send message Joined: 8 Jan 06 Posts: 223 Credit: 3,546 RAC: 0 |
Attention PowerPC Mac users Unfortunately, the current rosetta@home version (5.62) doesn't work on all power-PC's. It has to do with updates to the BOINC API code (out of our hands!), and we suspect that it only involves users with Mac OS X 10.3.9, because we didn't see any problems on our local powerPC machines or on our test server ralph. David Kim and I are working on it, right now. If you want to help, please do attach your project to ralph -- there will be an update to 5.63 later tonight that will (hopefully) fix the problem! I just started this project today, and it’s not going at all well so far. All three of the tasks I’ve begun errored out immediately: the output in the results says<message> process got signal 5 </message> <stderr_txt> dyld: rosetta_5.62_powerpc-apple-darwin Undefined symbols: rosetta_5.62_powerpc-apple-darwin undefined reference to ___cxa_atexit expected to be defined in /usr/lib/libSystem.B.dylib </stderr_txt> |
Rhiju Volunteer moderator Send message Joined: 8 Jan 06 Posts: 223 Credit: 3,546 RAC: 0 |
Working on it. For now, we're going to try linking the 32bit build to be the 64bit build -- not optimized, unfortunatley, but at least it should run! Still no 64bit support ='(. |
MattDavis Send message Joined: 22 Sep 05 Posts: 206 Credit: 1,377,748 RAC: 0 |
We appreciate your hard work. |
Odysseus Send message Joined: 3 May 07 Posts: 14 Credit: 241,831 RAC: 0 |
If you want to help, please do attach your project to ralph -- there will be an update to 5.63 later tonight that will (hopefully) fix the problem! Sorry, I don’t know what you mean by “attach your project to ralph”. Is that a library? A repair utility? Where can I download it? At any rate I’m at home now—the host in question is at work—so I won’t be able to do anything until tomorrow. (I’ll suspend the project first thing, to stop the flow of bad results at least, but I probably won’t have a chance to tinker with anything until mid-afternoon.) If Mac OS 10.4.x and special libraries or auxiliary programs are needed here, I wish it would say so on the system-requirements page. I’d heard this was a reasonably Mac-friendly project … |
MattDavis Send message Joined: 22 Sep 05 Posts: 206 Credit: 1,377,748 RAC: 0 |
RALPH@home is the alpha project for Rosetta. http://ralph.bakerlab.org/ |
David E K Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 1 Jul 05 Posts: 1480 Credit: 4,334,829 RAC: 0 |
Odysseus, This is a very recent problem we are having. We just released an updated application (version 5.62) but unfortunately this version is crashing on OSX 10.3.9. We are working on a fix now. Ralph is our test project, http://ralph.bakerlab.org We always test updates on ralph before releasing on rosetta@home but there are not enough mac participants (particularly w/ 10.3.9) to do thorough tests. Sorry for any inconvenience. We should have a stable release soon and the boinc client should automatically update when it is available. |
MattDavis Send message Joined: 22 Sep 05 Posts: 206 Credit: 1,377,748 RAC: 0 |
Someone -1ed my helpful post above ;_; I must have a stalker <3 |
ramostol Send message Joined: 6 Feb 07 Posts: 64 Credit: 584,052 RAC: 0 |
We always test updates on ralph before releasing on rosetta@home but there are not enough mac participants (particularly w/ 10.3.9) to do thorough tests. Well, I attached to Ralph to avoid such problems as this. But for a month now (after the public release of 5.59) I have got the message "No work from project", and I am simply unable to test your wus if you do not send me the necessary test files... -- R. A. Mostol MacOS 10.3.9 |
Greg_BE Send message Joined: 30 May 06 Posts: 5691 Credit: 5,859,226 RAC: 0 |
The great super cruncher god matt got -1'd? shame on the person who did that We always test updates on ralph before releasing on rosetta@home but there are not enough mac participants (particularly w/ 10.3.9) to do thorough tests. |
Sailor Send message Joined: 19 Mar 07 Posts: 75 Credit: 89,192 RAC: 0 |
Someone -1ed my helpful post above ;_; I help you out :D +1 |
hrebml Send message Joined: 17 Feb 07 Posts: 5 Credit: 50,521 RAC: 0 |
Hi, I've attached to Ralph and a new work unit is downloading. Should I detach rosetta@home from BOINC, or would it somehow be useful for y'all to have that continue to run errors til this is straightened out? Bests, Herb |
anders n Send message Joined: 19 Sep 05 Posts: 403 Credit: 537,991 RAC: 0 |
Hi, I would set it to no new work and wait for the new app before switching it on again. Anders n |
Odysseus Send message Joined: 3 May 07 Posts: 14 Credit: 241,831 RAC: 0 |
We always test updates on ralph before releasing on rosetta@home but there are not enough mac participants (particularly w/ 10.3.9) to do thorough tests. Having got the impression from Rhiju’s postings that more Macs were wanted there, I attached my G4 as soon as I got the chance today. Evidently I was wrong, because I too am getting “No work from project” messages. Maybe there’s a reason, beyond ‘demographics’, that Mac users aren’t exactly queuing up to help … Fri May 4 14:07:58 2007|ralph@home|Sending scheduler request to http://ralph.bakerlab.org/ralph_cgi/cgi Fri May 4 14:07:58 2007|ralph@home|Reason: To fetch work Fri May 4 14:07:58 2007|ralph@home|Requesting 86400 seconds of new work Fri May 4 14:08:03 2007|ralph@home|Scheduler request succeeded [color=red]Fri May 4 14:08:03 2007|ralph@home|No work from project[/color] Fri May 4 14:08:03 2007|ralph@home|Deferring scheduler requests for 13 minutes and 42 seconds |
komandar Send message Joined: 13 Dec 06 Posts: 4 Credit: 767,791 RAC: 0 |
Working on it. For now, we're going to try linking the 32bit build to be the Hmm weird. It does not work for me. Here is a part from my message-window... maybe it will help you: 04.05.2007 22:22:04|rosetta@home|Master file download succeeded 04.05.2007 22:22:04|rosetta@home|Sending scheduler request: Project initialization 04.05.2007 22:22:04|rosetta@home|Requesting 1 seconds of new work 04.05.2007 22:22:05|rosetta@home|Scheduler RPC succeeded [server version 509] 04.05.2007 22:22:05|rosetta@home|Message from server: platform 'windows_x86_64' not found 04.05.2007 22:22:05|rosetta@home|New host venue: home 04.05.2007 22:22:05|rosetta@home|Deferring communication for 1 days 0 hr 0 min 0 sec 04.05.2007 22:22:05|rosetta@home|Reason: requested by project 04.05.2007 22:22:05|rosetta@home|Successfully attached to rosetta@home I've got also the problem that I won't become any units from rosetta like the user above. |
Sailor Send message Joined: 19 Mar 07 Posts: 75 Credit: 89,192 RAC: 0 |
Rosetta yet isnt sending work to the 64bit client. However, it works on RALPH, but im also getting the "no work" message. This brings me into a strange situation... The PC, where i got XP x64 is a dual boot system together with normal XP, im owning only the 120 days trial version from xp pro atm. So when im in x64, all I can do at this moment is... wait to get a piece of the workcake, and meanwhile do nothing... When i switch back to Win XP 32, where i usualy cruch rosetta, im not able to get 64bit work ^_^ Can I run the exactly same installation, that usualy the 32bit windows is running inside the 64 bit windows, and even resume started workunits there ? or will i crash the WUs with that ? Then I would open both BOINC clients, cruniching rosetta and waiting for RALPH to send some work. |
PieBandit Send message Joined: 17 Apr 07 Posts: 6 Credit: 228,220 RAC: 0 |
My computer AMD64 x2 Kubuntu 7.04 running 5.62 32 bit linux client as anonymous platform. stderr out <core_client_version>5.4.11</core_client_version> <stderr_txt> Graphics are disabled due to configuration... # cpu_run_time_pref: 10800 # random seed: 2481505 SIGABRT: abort called Stack trace (15 frames): [0x8c9d71b] [0x8c9854c] [0xffffe500] [0x8d086d4] [0x8d1d5bf] [0x8d22736] [0x8d22903] [0x8cf3331] [0x8cf4d59] [0x83d585b] [0x8d08c1f] [0x8c9a1df] [0x8c9b7af] [0x8c947e5] [0x8d34cca] Exiting... Graphics are disabled due to configuration... # cpu_run_time_pref: 10800 ====================================================== DONE :: 1 starting structures 9690.17 cpu seconds This process generated 8 decoys from 8 attempts ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down... </stderr_txt> Validate state Valid Every other single WU rosetta tried had failed and threw SIGABRT codes in the stderr. I upgraded to the 5.62 to give it a chance, and it threw the error, but claimed it completed and gave me credit. Is this valid? I took a look at some other user's results, and didn't see any abort codes |
Odysseus Send message Joined: 3 May 07 Posts: 14 Credit: 241,831 RAC: 0 |
My G4 Mac got some RALPH@home work this evening; the first WU had an error (which I’ll post over there), but it appears to have got most of the way through the next one it received because now I see that it’s downloaded a third one. Please excuse my peevish tone earlier; it hasn’t been a good week. :( |
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Number crunching :
Problems with Rosetta version 5.62
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