Florescent proteins designed entirely from scratch

Message boards : Rosetta@home Science : Florescent proteins designed entirely from scratch

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Jim1348

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Message 89567 - Posted: 16 Sep 2018, 14:36:22 UTC - in response to Message 89563.  
Last modified: 16 Sep 2018, 14:37:48 UTC

That really should be placed (probably by the moderator) in a sticky entitled "Research Highlights" or something like that, so that it is easily accessible and does not get lost. A significant result like that can not be expected all the time, but it is very encouraging when it happens.

Thanks for the update.
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Profile [VENETO] boboviz

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Message 89569 - Posted: 16 Sep 2018, 18:18:20 UTC - in response to Message 89567.  

That really should be placed (probably by the moderator) in a sticky entitled "Research Highlights" or something like that, so that it is easily accessible and does not get lost. A significant result like that can not be expected all the time, but it is very encouraging when it happens.


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Profile Jacques Laurence do Nascimento Silva
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Message 89660 - Posted: 29 Sep 2018, 12:55:52 UTC

This is really motivating, seeing that the project is generating results.
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Profile dcdc

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Message 89978 - Posted: 9 Dec 2018, 16:42:51 UTC
Last modified: 9 Dec 2018, 17:38:59 UTC

This sounds really exciting! Thanks for posting the update, Anastassia. Quick question - approximately how many models did you run on Rosetta@home for the validation process?

I fully agree that this forum needs a research highlights channel, or maybe they just need to be added to a thread in "News" that has links to all of the research posts?

Also, here are the formatted links:
https://www.bakerlab.org/index.php/2018/09/12/de-novo-fluorescent-proteins/
https://cen.acs.org/physical-chemistry/periodic-table/Designer-protein-tackles-binding/96/i37
http://www.sciencemag.org/news/2018/09/watch-these-new-designer-proteins-light-when-they-hit-their-target
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Trotador

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Message 89997 - Posted: 13 Dec 2018, 23:35:26 UTC

Congratulations!

Keep the good work!
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Christopher Kindred

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Message 93974 - Posted: 9 Apr 2020, 13:36:13 UTC - in response to Message 89563.  

Thank you, for sharing this success story. As a CPU volunteer, I often wonder at the results; though, I have never taken the time to search things out before. This COVID-19 Pandemic has given me a bit more time to explore...and, perhaps, to slow down a bit.

Thanks, again!
ChrysBlaze
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torma99

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Message 93982 - Posted: 9 Apr 2020, 16:47:10 UTC - in response to Message 90004.  

Thanks for the positive feedback! We ran validation on Rosetta@home for 60-70 models for the first part of the work (the design of the fold, experimenting with different approaches) then another 50 designs with ligand-binding cavity.


Many thanks, to giving us insight to your project. Sounds really interesting and promising. Hope you will use Rosetta again for your work!
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Sid Celery

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Message 98732 - Posted: 1 Sep 2020, 16:46:16 UTC
Last modified: 1 Sep 2020, 16:46:37 UTC

This appears to be related - via @UWProteinDesign on twitter
In a new report, we describe the de novo design & characterization of selective ion channels, as well as larger pores that permit the passage of fluorescent molecules thru cell walls.

Computational design of transmembrane pores | @nature
#ProteinDesign
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Message boards : Rosetta@home Science : Florescent proteins designed entirely from scratch



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